PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.6AJ68
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 133aa    MW: 15376 Da    PI: 10.271
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.6AJ68genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.51.6e-0570103832
                  HHHHHHHHHHHHHHHHHCTSCCC........... CS
          HLH   8 rErrRRdriNsafeeLrellPkas.........k 32 
                  +E+rRR+ri++++  L+ l P++          k
  Aradu.6AJ68  70 VEQRRRRRIKEKMKALQHLSPNSIkiykleleqK 103
                  8******************999765565555550 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.101.2E-46992IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    Send to blast
MSQACSSLGE GVEALAEDVP AKPVPSKCSS KRSKAAEVHN VSEKVFLNSY RGFLWYLVLI  60
SFKLMVVFLV EQRRRRRIKE KMKALQHLSP NSIKIYKLEL EQKRLEEDAF VYNSLQQQPK  120
LSPVYQKKYV NAI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016201721.15e-41PREDICTED: transcription factor SPATULA isoform X1
RefseqXP_016201722.14e-41PREDICTED: transcription factor SPATULA isoform X2
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2348723
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.19e-06bHLH family protein